DryMass
0.9.1
  • Introduction
  • Theory Notes
  • Getting started
  • Tutorials
  • Code examples
  • Code reference
  • Changelog
  • Bilbliography
DryMass
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_images/drymass.png

DryMass is a Python library and a command-line tool for manipulating and analyzing quantitative phase microscopy images of cell-sized objects. This is the documentation of DryMass version 0.9.1.

Documentation¶

  • Introduction
    • What is DryMass?
    • What is quantitative phase imaging?
    • What are typical use cases of DryMass?
    • How should I cite DryMass?
  • Theory Notes
    • Computation of cell dry mass
    • Relative and absolute dry mass
    • Range of validity
    • Default parameters in DryMass
  • Getting started
    • Installing DryMass
    • Command-line interface
    • Configuration file
    • Troubleshooting
  • Tutorials
    • T1: Bead analysis (CLI)
    • T2: HL60 cell analysis (CLI)
    • T3: Correcting for background and geometry (CLI)
    • T4: Automating the analysis of large datasets (CLI)
  • Code examples
    • Dry mass computation with radial inclusion factor
    • Comparison of relative and absolute dry mass
  • Code reference
    • Command-line interface
    • Data analysis
    • Helper classes and methods
  • Changelog
  • Bilbliography

Indices and tables¶

  • Index
  • Module Index
  • Search Page
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© Copyright 2017, Paul Müller Revision ac95d33e.

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