Freezing / no output¶
If the CLI freezes and you see a blinking cursor for a very long time without any files being created or changed in the output directory (_dm appended to the input data set):
- Remove all files in the output directory, except for drymass.cfg.
- Run the analysis again.
Amplitude sensor image is over-saturated (Fiji)¶
When you open the
sensor_data.tif file generated by DryMass with
Fiji, you might encounter a situation where the
phase data (channel 1) looks fine, but the amplitude data (channel 2)
The reason for this is that Fiji does not automatically adjust the brightness and contrast for this multi-channel image series. The solution is to adjust the brightness manually. Go to Image | Adjust… | Brightness/Contrast and click the Auto button.